Dependency Dashboard

[renovate]

This issue lists Renovate updates and detected dependencies. Read the Dependency Dashboard docs to learn more.
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Abandoned Dependencies

The following dependencies have not received updates for an extended period and may be unmaintained.

Note

Packages are marked as abandoned when they exceed the abandonmentThreshold since their last release. Unlike deprecated packages with official notices, abandonment is detected by release inactivity.

View abandoned dependencies (7)

Datasource	Package	Last Updated
github-actions	hmarr/auto-approve-action	2024-02-03
poetry	art	2025-04-12
poetry	dask-jobqueue	2024-08-22
poetry	pytest-sugar	2025-08-23
poetry	sphinx-copybutton	2023-04-14
poetry	sphinxcontrib-contentui	2020-04-18
poetry	sphinxcontrib-details-directive	2019-09-22

Rate-Limited

The following updates are currently rate-limited. To force their creation now, click on a checkbox below.

• Lock file maintenance

Pending Status Checks

The following updates await pending status checks. To force their creation now, click on a checkbox below.

• Update dependency networkx to >=3.7,<3.8
• Update dependency ubuntu to v26

Open

The following updates have all been created. To force a retry/rebase of any, click on a checkbox below.

• Update dependency dask to >=2026.8.0,<2026.9.0
• Update dependency distributed to >=2026.8.0,<2026.9.0
• Click on this checkbox to rebase all open PRs at once

Detected Dependencies

github-actions (8)

.github/workflows/coveralls-main.yaml (2)

• ubuntu 24.04 → [Updates: 26.04]
• python 3.14

.github/workflows/daily.yaml (2)

• actions/checkout v7.0.1@3d3c42e5aac5ba805825da76410c181273ba90b1
• actions/setup-python v7.0.0@5fda3b95a4ea91299a34e894583c3862153e4b97

.github/workflows/pr.yaml (12)

• actions/upload-artifact v7.0.1@043fb46d1a93c77aae656e7c1c64a875d1fc6a0a
• actions/upload-artifact v7.0.1@043fb46d1a93c77aae656e7c1c64a875d1fc6a0a
• ubuntu 24.04 → [Updates: 26.04]
• python 3.14
• ubuntu 24.04 → [Updates: 26.04]
• python 3.14
• ubuntu 24.04 → [Updates: 26.04]
• python 3.14
• ubuntu 24.04 → [Updates: 26.04]
• python 3.14
• ubuntu 24.04 → [Updates: 26.04]
• python 3.14

.github/workflows/release.yaml (20)

• actions/checkout v7.0.1@3d3c42e5aac5ba805825da76410c181273ba90b1
• actions/setup-python v7.0.0@5fda3b95a4ea91299a34e894583c3862153e4b97
• actions/checkout v7.0.1@3d3c42e5aac5ba805825da76410c181273ba90b1
• peter-evans/create-pull-request v8.1.1@5f6978faf089d4d20b00c7766989d076bb2fc7f1
• hmarr/auto-approve-action v4.0.0@f0939ea97e9205ef24d872e76833fa908a770363
• actions/checkout v7.0.1@3d3c42e5aac5ba805825da76410c181273ba90b1
• softprops/action-gh-release v3.0.3@efb35369e0ad2afab669f228072c1b0d510eae64
• actions/checkout v7.0.1@3d3c42e5aac5ba805825da76410c181273ba90b1
• actions/setup-python v7.0.0@5fda3b95a4ea91299a34e894583c3862153e4b97
• actions/checkout v7.0.1@3d3c42e5aac5ba805825da76410c181273ba90b1
• conda-incubator/setup-miniconda v4.1.0@be893c923ea9cf1cf7cd510fbdde27c7e18cbdcb
• ubuntu 24.04 → [Updates: 26.04]
• python 3.14.7
• ubuntu 24.04 → [Updates: 26.04]
• ubuntu 24.04 → [Updates: 26.04]
• ubuntu 24.04 → [Updates: 26.04]
• ubuntu 24.04 → [Updates: 26.04]
• python 3.14.7
• ubuntu 24.04 → [Updates: 26.04]
• python 3.14

.github/workflows/update_regression_baselines.yaml (5)

• actions/checkout v7.0.1@3d3c42e5aac5ba805825da76410c181273ba90b1
• actions/setup-python v7.0.0@5fda3b95a4ea91299a34e894583c3862153e4b97
• stefanzweifel/git-auto-commit-action v7.2.0@4a55954c782fc1ea30b9056cd3e7a2b40ca8887d
• ubuntu 24.04 → [Updates: 26.04]
• python 3.14

.github/workflows/update-copyright-years-in-license-file.yaml (2)

• actions/checkout v7.0.1@3d3c42e5aac5ba805825da76410c181273ba90b1
• FantasticFiasco/action-update-license-year v3.0.4@f180e962fa988db222d8f03ef4636750312d1b3d

.github/workflows/weekly-docs.yaml (3)

• actions/checkout v7.0.1@3d3c42e5aac5ba805825da76410c181273ba90b1
• actions/setup-python v7.0.0@5fda3b95a4ea91299a34e894583c3862153e4b97
• actions/upload-artifact v7.0.1@043fb46d1a93c77aae656e7c1c64a875d1fc6a0a

.github/workflows/weekly-regression.yaml (5)

• actions/upload-artifact v7.0.1@043fb46d1a93c77aae656e7c1c64a875d1fc6a0a
• ubuntu 24.04 → [Updates: 26.04]
• python 3.14
• ubuntu 24.04 → [Updates: 26.04]
• python 3.14

poetry (1)

pyproject.toml (32)

• numpy >=2.3,<3.0
• mdanalysis >=2.10,<3.0
• pandas >=3,<3.1
• psutil >=7.1,<8.0
• PyYAML >=6.0,<7.0
• python-json-logger >=4.0,<5.0
• rich >=15,<15.1
• art >=6.5,<7.0
• networkx >=3.6,<3.7 → [Updates: >=3.7,<3.8]
• matplotlib >=3.11,<3.12
• waterEntropy >=2,<2.3
• requests >=2.32,<3.0
• rdkit >=2025.9.5
• numba >=0.65.1,<0.70
• dask >=2026.1.2,<2026.2.0 → [Updates: >=2026.8.0,<2026.9.0]
• dask-jobqueue >=0.9.0,<0.10
• distributed >=2026.1.2,<2026.2.0 → [Updates: >=2026.8.0,<2026.9.0]
• pytest >=9.0,<10.0
• pytest-cov >=7.0,<8.0
• pytest-sugar >=1.1,<2.0
• pre-commit >=4.5,<5.0
• ruff >=0.16,<0.17
• pylint >=4.0,<5.0
• rstcheck >=6.2,<7.0
• sphinx >=9.1,<9.2
• nbsphinx >=0.9,<1.0
• sphinx-rtd-theme >=3,<3.2
• sphinxcontrib-contentui >=0.2,<1.0
• sphinxcontrib-details-directive >=0.1,<1.0
• sphinx-copybutton >=0.5,<1.0
• furo >=2025.0,<2026.0
• markupsafe >=3.0,<4.0

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