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@DenisTitovLab

Titov Lab

Metabolism and Aging Research at the University of California, Berkeley

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  1. CellMetabolism.jl CellMetabolism.jl Public

    A package for simulating human cell metabolic pathways and studying their regulation by mass action and allosteric feedback.

    Julia 1 1

  2. EnzymeRates.jl EnzymeRates.jl Public

    package to derive enzyme rate equations from data or from mechanism

    Julia

  3. CellMetabolismBase.jl CellMetabolismBase.jl Public

    A framework for simulating cellular metabolic pathways and studying their regulation by mass action and allosteric feedback.

    Julia 1

Repositories

Showing 8 of 8 repositories
  • GlycolysisPentosePathwayPhaseMap.jl Public

    Interactive explorer + static phase map for the mammalian glycolysis/pentose-phosphate-pathway demand response (cached-data viewer with an optional kinetic-model recompute extension).

    DenisTitovLab/GlycolysisPentosePathwayPhaseMap.jl's past year of commit activity
    Julia 0 MIT 0 0 3 Updated Sep 17, 2026
  • EnzymeRates.jl Public

    package to derive enzyme rate equations from data or from mechanism

    DenisTitovLab/EnzymeRates.jl's past year of commit activity
    Julia 0 MIT 0 0 3 Updated Sep 17, 2026
  • CellMetabolism.jl Public

    A package for simulating human cell metabolic pathways and studying their regulation by mass action and allosteric feedback.

    DenisTitovLab/CellMetabolism.jl's past year of commit activity
    Julia 1 MIT 1 0 1 Updated Jul 29, 2026
  • CellMetabolismBase.jl Public

    A framework for simulating cellular metabolic pathways and studying their regulation by mass action and allosteric feedback.

    DenisTitovLab/CellMetabolismBase.jl's past year of commit activity
    Julia 0 MIT 1 0 2 Updated Jul 29, 2026
  • DataDrivenEnzymeRateEqs.jl Public

    Package for identifying enzyme rate equations from kinetic data

    DenisTitovLab/DataDrivenEnzymeRateEqs.jl's past year of commit activity
    Julia 1 MIT 0 0 2 Updated Jun 22, 2026
  • ATPGrowth Public

    Glycolytic ATP production enables rapid mammalian cell growth

    DenisTitovLab/ATPGrowth's past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Apr 14, 2026
  • Glycolysis.jl Public

    Package for modeling glycolysis activity

    DenisTitovLab/Glycolysis.jl's past year of commit activity
    Julia 6 MIT 0 0 0 Updated Mar 28, 2025
  • WarburgEffectModel Public
    DenisTitovLab/WarburgEffectModel's past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Apr 23, 2024

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