Skip to content
View ShixiangWang's full-sized avatar
🀄
Open Source Better Science
🀄
Open Source Better Science
897 followers · 580 following

Achievements

Achievement: Pair Extraordinairex3Achievement: Galaxy BrainAchievement: Starstruckx2Achievement: YOLOAchievement: QuickdrawAchievement: Pull Sharkx3Achievement: Arctic Code Vault Contributor

Achievements

Achievement: Pair Extraordinairex3Achievement: Galaxy BrainAchievement: Starstruckx2Achievement: YOLOAchievement: QuickdrawAchievement: Pull Sharkx3Achievement: Arctic Code Vault Contributor

Highlights

  • Pro

Organizations

@ropensci @conda-forge @openbiox @OncoHarmony-Network @Traitome @oxo-flow-community

Block or report ShixiangWang

Block user

Prevent this user from interacting with your repositories and sending you notifications. Learn more about blocking users.

You must be logged in to block users.

Content in all repositories owned by your account will be closed.
Maximum 250 characters. Please don’t include any personal information such as legal names or email addresses. Markdown is supported. This note will only be visible to you.
Report abuse

Contact GitHub support about this user’s behavior. Learn more about reporting abuse.

Report abuse
ShixiangWang/README.md

Dr. Shixiang Wang | Associate Professor at CSU

Leader of Laboratory of In Silico Oncology and Medicine, and

co-leadership of OncoHarmony Network with Prof. Jian-Guo Zhou.

About

🔬 Research Focus: Bioinformatics · Cancer Genomics · Multi-omics Analysis
🛠️ Development: Developer specializing in open-source tools for reproducible bioinformatics
🎯 Mission: Building accessible workflows and packages for clinical and research bioinformatics

Resources & Links:

Featured Projects

🌟 UCSCXenaShiny — Interactive Shiny app for exploring UCSC Xena datasets
🔧 UCSCXenaTools — R toolkit to access and manipulate UCSC Xena data
⚗️ bregr — Selected research software from WangLab @ CSU
📰 weekly — Openbiox Weekly: curated bioinformatics news and resources
🎓 Tech-Workshop — OncoHarmony Network workshops and teaching materials

Connect with Me

💬 Discussion & Support: GitHub Discussions | Email

bilibili wechat zhihu twitter scholar

GitHub Stats

🐱 My GitHub Data

📦 5.0 MB Used in GitHub's Storage

🏆 4,802 Contributions in the Year 2026

🚫 Not Opted to Hire

📜 100 Public Repositories

🔑 31 Private Repositories

I'm an Early 🐤

🌞 Morning                4951 commits        ████░░░░░░░░░░░░░░░░░░░░░   16.99 % 
🌆 Daytime                11083 commits       ██████████░░░░░░░░░░░░░░░   38.04 % 
🌃 Evening                9844 commits        ████████░░░░░░░░░░░░░░░░░   33.79 % 
🌙 Night                  3257 commits        ███░░░░░░░░░░░░░░░░░░░░░░   11.18 %

📅 I'm Most Productive on Tuesday

Monday                   4302 commits        ████░░░░░░░░░░░░░░░░░░░░░   14.77 % 
Tuesday                  4706 commits        ████░░░░░░░░░░░░░░░░░░░░░   16.15 % 
Wednesday                4703 commits        ████░░░░░░░░░░░░░░░░░░░░░   16.14 % 
Thursday                 4587 commits        ████░░░░░░░░░░░░░░░░░░░░░   15.74 % 
Friday                   4640 commits        ████░░░░░░░░░░░░░░░░░░░░░   15.93 % 
Saturday                 2973 commits        ███░░░░░░░░░░░░░░░░░░░░░░   10.20 % 
Sunday                   3224 commits        ███░░░░░░░░░░░░░░░░░░░░░░   11.07 %

🤖 AI Coding This Week

No AI Coding Activity Tracked This Week

I Mostly Code in R

R                        99 repos            ███████████░░░░░░░░░░░░░░   45.62 % 
Python                   30 repos            ███░░░░░░░░░░░░░░░░░░░░░░   13.82 % 
HTML                     25 repos            ███░░░░░░░░░░░░░░░░░░░░░░   11.52 % 
Rust                     11 repos            █░░░░░░░░░░░░░░░░░░░░░░░░   05.07 % 
SCSS                     3 repos             ░░░░░░░░░░░░░░░░░░░░░░░░░   01.38 %

Last Updated on 20/09/2026 21:34:12 UTC

These Readme stats are generated using github action awesome-readme-stats

NOTE: Top languages does not indicate my skill level or anything like that. It is just a metric of which languages have been hosted by me on GitHub based on the usage across repositories.

Pinned Loading

  1. sigminer sigminer Public

    🌲 An easy-to-use and scalable toolkit for genomic alteration signature (a.k.a. mutational signature) analysis and visualization in R https://shixiangwang.github.io/sigminer/reference/index.html

    R 163 20

  2. openbiox/weekly openbiox/weekly Public

    生信爱好者周刊（每周日发布）

    HTML 461 30

  3. ropensci/UCSCXenaTools ropensci/UCSCXenaTools Public

    📦 An R package for accessing genomics data from UCSC Xena platform, from cancer multi-omics to single-cell RNA-seq https://cran.r-project.org/web/packages/UCSCXenaTools/

    R 117 13

  4. openbiox/UCSCXenaShiny openbiox/UCSCXenaShiny Public

    📊 An R package for interactively exploring UCSC Xena https://xenabrowser.net/datapages/; Book: https://lishensuo.github.io/UCSCXenaShiny_Book; App online: https://shiny.zhoulab.ac.cn/UCSCXenaShiny,…

    R 103 33

  5. openbiox/Cookbook-for-R-Chinese openbiox/Cookbook-for-R-Chinese Public

    📚Cookbook for R 中文翻译

    TeX 142 68

  6. pybook pybook Public

    《交互的Python：数据分析入门》

    134 15