Berkeley Bioinformatics Open-source Projects (BBOP), located at the Lawrence Berkeley National Laboratory, is a group of scientific researchers and software engineers dedicated to developing tools and applying computational technologies to problems in biology and biomedicine.
This GitHub organization houses our website content and various other repos for public or internal use.
For more info about BBOP, including our people and projects, please see our website!
An ontology modeling classes and relationships describing deep learning networks, their component layers and activation functions, machine learning methods, as well as AI/ML potential biases.
Best practices for BBOP group repos, intended for coding agents and humans
Schema for configurations / stylesheets for visualizing ontology and KGs
Python 5
An ontology modeling classes and relationships describing deep learning networks, their component layers and activation functions, machine learning methods, as well as AI/ML potential biases.
A Rails application for biological ontologies
JavaScript library for generating request information for interactions with a Minerva server.
A subclass of bbop-graph that layers on a complete annotation and graph editing model for the Noctua set of tools.
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