Skip to content

Navigation Menu

Appearance settings

View all features
- BY COMPANY SIZE
  Enterprises
  Small and medium teams
  Startups
  Nonprofits
- BY USE CASE
  App Modernization
  DevSecOps
  DevOps
  CI/CD
  View all use cases
- BY INDUSTRY
  Healthcare
  Financial services
  Manufacturing
  Government
  View all industries
View all solutions
- EXPLORE BY TOPIC
  AI
  Software Development
  DevOps
  Security
  View all topics
- EXPLORE BY TYPE
  Customer stories
  Events & webinars
  Ebooks & reports
  Business insights
  GitHub Skills
- SUPPORT & SERVICES
  Documentation
  Customer support
  Community forum
  Trust center
  Partners
View all resources
- COMMUNITY
  GitHub SponsorsFund open source developers
- PROGRAMS
  Security Lab
  Maintainer Community
  GitHub Stars
  Archive Program
- REPOSITORIES
  Topics
  Trending
  Collections
- ENTERPRISE SOLUTIONS
  Enterprise platformAI-powered developer platform
- AVAILABLE ADD-ONS
  GitHub Advanced SecurityEnterprise-grade security features
  Copilot for BusinessEnterprise-grade AI features
  Premium SupportEnterprise-grade 24/7 support
Pricing

Appearance settings

You signed in with another tab or window. Reload to refresh your session. You signed out in another tab or window. Reload to refresh your session. You switched accounts on another tab or window. Reload to refresh your session.

Dismiss alert

MacManes Lab

Overview
Repositories
Projects
Packages
People

More

Overview
Repositories
Projects
Packages
People

Pinned Loading

Oyster_River_Protocol Oyster_River_Protocol Public

Official Repository of the Oyster River Protocol for Transcriptome Assembly

Python 17 15
pytransrate pytransrate Public

Forked from blahah/transrate

Understand your transcriptome assembly

Python

Repositories

Loading

Type

Select type

All Public Sources Forks Archived Mirrors Templates

Language

Select language

All C C++ HTML Jupyter Notebook Makefile Perl Python R Shell TeX

Sort

Select order

Last updated Name Stars

Showing 10 of 56 repositories

Oyster_River_Protocol Public
Official Repository of the Oyster River Protocol for Transcriptome Assembly

macmanes-lab/Oyster_River_Protocol's past year of commit activity

Python 17 CC0-1.0 15 24 4 Updated Sep 20, 2026
pytransrate Public Forked from blahah/transrate
Understand your transcriptome assembly

macmanes-lab/pytransrate's past year of commit activity

Python 0 33 0 0 Updated Sep 18, 2026
spatial Public

macmanes-lab/spatial's past year of commit activity

0 CC0-1.0 0 0 0 Updated May 24, 2023
G606_Phylogenetics Public
For Gen606 Phylogenetics lesson

macmanes-lab/G606_Phylogenetics's past year of commit activity

0 CC0-1.0 1 0 0 Updated May 3, 2023
DoveParentsRNAseq Public
Characterizing the neurogenomics of parental care in the rock dove

macmanes-lab/DoveParentsRNAseq's past year of commit activity

R 5 1 6 0 Updated Dec 29, 2021
orp_website Public
Website for Oyster River Protocol

macmanes-lab/orp_website's past year of commit activity

3 CC0-1.0 1 0 0 Updated Apr 22, 2021
driftR Public Forked from cjbattey/driftR
population genetic simulations with R and Shiny

macmanes-lab/driftR's past year of commit activity

R 0 10 0 0 Updated Nov 17, 2020
dnazoo_annotation Public
This is the code to reproduce the DNAzoo genome annotations.

macmanes-lab/dnazoo_annotation's past year of commit activity

Shell 1 GPL-3.0 1 1 0 Updated Jul 7, 2020
pecr_genome Public
Files used for pecr genome

macmanes-lab/pecr_genome's past year of commit activity

Shell 0 CC0-1.0 0 0 0 Updated May 27, 2020
HackMD Public
HackMD notes

macmanes-lab/HackMD's past year of commit activity

0 CC0-1.0 0 0 0 Updated Mar 26, 2020

View all repositories

People

Top languages

Loading…

Uh oh!

There was an error while loading. Please reload this page.

Most used topics

Loading…

Uh oh!

There was an error while loading. Please reload this page.

Footer

© 2026 GitHub, Inc.

Footer navigation

Terms
Privacy
Security
Status
Community
Docs
Contact

You can’t perform that action at this time.