hemodynamics

HemoCell is a high-performance suspension code for simulating blood flows developed by the Computational Science Lab at the University of Amsterdam.

A high performance parallel lattice-Boltzmann code for large scale fluid flow in complex geometries

PyHRF is a set of tools to analyze fMRI data and specifically study hemodynamics.

Non-intrusive reduced-order modeling with geometry-informed snapshots. Current based registration is applied to compute the diffeomorphism between snapshots.

Finite volume-based monotone code for blood flow hemodynamics simulations!

Detecting elevated hemodynamics from the 12-lead ECG alone

Reservoir analysis for Sphygmocor files

Reservoir analysis for BPplus files

In partnership with Emory School of Medicine, providing a user-friendly interface to calculate hemodynamic values for the ICU.

Masters thesis: A lumped parameter model and solver for simulating blood flow.

Modular MATLAB toolbox for fNIRS analysis: import, preprocessing, hemoglobin conversion, QC, block/GLM modeling, group statistics (LME), connectivity & hyperscanning, and 3D visualization / diffuse optical tomography.

WillisWorks is a conceptual teaching tool for exploring how arterial anatomy, pressure, resistance, collateral pathways, venous outflow, oxygen exchange, and metabolic demand interact.

MATLAB code for cardiovascular system simulation, including 0D heart models, 1D pulse wave blood-flow models, and coupled 0D-1D outlet boundary models.

End-to-end fNIRS BCI pipeline — decodes mental states (REST/MENTAL/MOTOR) from hemodynamic signals using ICA, CBSI, and classical ML classifiers

NeuroSolve is the open-source implementation of NeuroCFD

Closed-loop cardiovascular model (0D, 8 compartments) with digital twin layer for mitral regurgitation. Predicts invasive hemodynamics from noninvasive echo inputs.

HRfunc is a python preprocessing and modeling tool for estimating neural activity from hemoglobin concentration through deconvolving hemodynamic response functions and neural activity from fNIRS signals. Toeplitz deconvolution with Tikhonov regularization is employed for HRF and neural activity estimation.

Medical Image to Patient-Specific Reduced-Order Hemodynamic Model Simulation in Minutes: CT/MR or a vessel surface to tuned 0D and 1D blood-flow simulations, one window or one command

CVSim 1.16 cardiovascular simulation program converted entirely to Java.