Nextflow workflows to assign Salmonella serotype based on Genome similarity using MASH, SOURMASH and KMA.
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Updated
Sep 22, 2026 - Nextflow
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ncbi-pathogens
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Functions for working with NCBI's Pathogen Detection data
bioinformatics r comparative-genomics pangenomics bacterial-genomes pathogenomics pathogen-detection ncbi-pathogens
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Updated
Apr 2, 2024 - R
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