protenix

Here are 5 public repositories matching this topic...

tiagomonteiro0715 / fast_trimul

A drop-in, hardware-agnostic library for Fused Triangle Multiplicative Updates across AlphaFold3-family models, powered by CUTLASS CuTe kernels.

Updated Sep 10, 2026
Python

jwliaomath / CoCoFold2

Star

Official implementation of CoCoFold2: scalable latent refinement of protein structure predictions from limited-particle cryo-EM data using a frozen Protenix-v1 diffusion prior. Supports single-GPU and component-parallel refinement.

bioinformatics structural-biology protein-structure pytorch cryo-em multi-gpu diffusion-models latent-optimization protenix

Updated Sep 25, 2026
Python

sness23 / dockvision

Star

Open-source CLI-shaped web platform for protein-ligand docking on serverless GPUs (CASP-aware)

protein-ligand-docking computational-biology casp sveltekit molstar boltz gnina agpl-3 runpod protenix

Updated May 21, 2026
TypeScript

ChiaChunL / foldrunner

Star

All-vs-all protein structure-prediction panels with one alignment per sequence, for AlphaFold 3, Boltz-2, Protenix, Chai-1, ColabFold, AlphaFold2-Multimer, AlphaFold Server and SeedFold

bioinformatics structural-biology protein-protein-interaction multiple-sequence-alignment protein-structure-prediction alphafold boltz colabfold protenix chai-1