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@veg

iGEM/UCSD evolutionary biology and bioinformatics group

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  1. hyphy hyphy Public

    HyPhy: Hypothesis testing using Phylogenies

    HyPhy 270 71

  2. hivtrace hivtrace Public

    JavaScript 23 15

  3. phylotree.js phylotree.js Public

    Interactive viewer of phylogenetic trees

    JavaScript 201 77

Repositories

Showing 10 of 115 repositories
  • HyphAeon Public
    veg/HyphAeon's past year of commit activity
    Python 11 MIT 3 14 3 Updated Sep 21, 2026
  • primaeon Public

    PrimAeon: the HyphAeon application. Drop a codon alignment; every analysis runs in the browser and one report streams in. Web app, runtime, MCP server and job server.

    veg/primaeon's past year of commit activity
    JavaScript 0 1 0 3 Updated Sep 20, 2026
  • chronaeon Public

    Benchmark data for Cronaeon

    veg/chronaeon's past year of commit activity
    HTML 0 0 0 0 Updated Sep 20, 2026
  • datamonkey-js-server Public
    veg/datamonkey-js-server's past year of commit activity
    JavaScript 3 7 2 8 Updated Sep 19, 2026
  • datamonkey3 Public
    veg/datamonkey3's past year of commit activity
    JavaScript 2 1 19 0 Updated Sep 17, 2026
  • nextstrain_dashboard Public

    Open Data Nextstrain Dashboard

    veg/nextstrain_dashboard's past year of commit activity
    Svelte 0 0 0 0 Updated Sep 15, 2026
  • pyeuk Public

    Cyclospora MLST

    veg/pyeuk's past year of commit activity
    Python 2 Apache-2.0 2 0 1 Updated Sep 14, 2026
  • tools-iuc Public Forked from galaxyproject/tools-iuc

    Tool Shed repositories maintained and developed by the Intergalactic Utilities Commission

    veg/tools-iuc's past year of commit activity
    HTML 0 MIT 545 3 0 Updated Sep 14, 2026
  • datamonkey-js Public

    Datamonkey - Run state-of-the-art statistical models through the comfort of your browser

    veg/datamonkey-js's past year of commit activity
    JavaScript 10 10 0 8 Updated Sep 10, 2026
  • tn93 Public

    TN93 fast distance calculator

    veg/tn93's past year of commit activity
    C++ 21 MIT 5 10 0 Updated Sep 7, 2026
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